Stanford Chinese Postdoc Journal Club and Oral Presentation Improvement
1 Introduction
1.1 Purpose of the Course
This course aims to help bring cutting-edge interdisciplinary research topics related to biomedical sciences. We not only discuss the most recent advances in research publications but also help to improve the presentation skills of Non-native English-speaker. This presentation platform is also intended to promote collaborations between participants. The majority of the course participants are postdoctoral fellows from Stanford Schools of Medicine, with several external affiliated members.
1.2 Leadership
1.2.1 Course Organizer
1.2.2 Finance Manager
2 Course History
| Date | Presenter | Lab | Presentation title |
|---|---|---|---|
| 2020-02-11 | Xin Zhou | Snyder Lab | Metagenomics and immunology |
| 2020-03-06 | Sai Zhang | Snyder Lab | Introduction of machine learning 1 |
| 2020-03-13 | Sai Zhang | Snyder Lab | Introduction of machine learning 2 |
| 2020-03-20 | Xiaotao Shen | Snyder Lab | R Markdown, jupyter and Github |
| 2020-03-27 | Meng Wang | Snyder Lab | Multiple Hypothesis testing |
| 2020-04-03 | Xiaowei Zhu | Urban Lab | Somatic Mutation and Transposome 1 |
| 2020-04-10 | Si Wu | Snyder Lab | Introduction to Lipidomics |
| 2020-04-17 | Chuchu Wang | Brunger Lab | Introduction to Structural Biology |
| 2020-04-24 | Peng Gao | Snyder Lab | Introduction to Exposome |
| 2020-05-01 | Bingqing Zhao | Snyder Lab | Introduction to Epigenomics |
| 2020-05-08 | Ziye Xing | The Genetics Bioinformatics Service Center | Linux, slurm and pipeline basics |
| 2020-07-24 | Xin Zhou | Snyder Lab | Introduction to Virology |
| 2020-07-31 | Hong Zheng | Khatri Lab | Batch effect correction in Single cell |
| 2020-08-14 | Peng Gao | Snyder Lab | Introduction to chemical exposome |
| 2020-08-28 | Xiaowei Zhu | Urban Lab | Somatic Mutation and Transposome 2 |
| 2020-09-18 | Chuchu Wang | Brunger Lab | Correlative three-dimensional super-resolution and block-face electron microscopy of whole vitreously frozen cells |
| 2020-10-02 | Xiaotao Shen | Snyder Lab | NA |
| 2020-10-09 | Yingxiao Wang | Fosun Capital | Intellectual Property and Bioentrepreneurship |
| 2020-10-16 | Bingqing Zhao | Snyder Lab | NA |
| 2020-10-23 | Ming-Shian Tsai | Snyder Lab | NA |
| 2020-10-30 | Xiang Zhao | Garcia Lab | Immune receptor inhibition through enforced phosphatase recruitment |
| 2020-11-13 | Pingping Qu | Urban Lab | NA |
| 2020-11-27 | Xinyue Allison Zhang | Snyder Lab | Biological exposome |
| 2020-12-04 | Songjie Chen | Snyder Lab | Introduction to N-linked glycosylation |
| 2020-12-18 | Meng Wang | Snyder Lab | NA |
| 2021-01-08 | Si Wu | Snyder Lab | NA |
| 2021-01-15 | Sai Zhang | Snyder Lab | Introduction to deep learning |
| 2021-01-29 | Ming-Shian Tsai | Snyder Lab | Statin therapy is associated with lower prevalence of gut microbiota dysbiosis |
| 2021-02-19 | Linda Lan | Snyder Lab | Polyreactive Broadly Neutralizing B cells Are Selected to Provide Defense against Pandemic Threat Influenza Viruses. |
| 2021-02-26 | Yizhou Zhu | Snyder Lab | The 3D organization of chromatin |
| 2021-04-02 | Xin Zhou | Snyder Lab | Microbiome in immunotherapy |
| 2021-04-16 | Hong Zheng | Khatri Lab | Multi-cohort analysis of host immune response identifies conserved protective and detrimental modules associated with severity across viruses. |
| 2021-04-30 | Peng Gao | Snyder Lab | Multiomics in Exposome |
| 2021-05-07 | Chuchu Wang | Brunger Lab | Cognition Therapeutics to Advance Digital Therapeutic for Alzheimer’s Disease |
| 2021-05-14 | Xiaotao Shen | Snyder Lab | Reproducible analysis with R Markdown |
| 2021-05-21 | Chenchen Zhu | Steinmetz Lab | Third Generation Sequencing and its Application in RNA-seq |
| 2021-06-04 | Xin Chen | Davis Lab | Introduction to Immunotherapy |
| 2021-06-18 | Pingping Qu | Urban Lab | Spatial resolved transcriptomics |
| 2021-06-25 | Bingqing Zhao | Snyder Lab | Multipmics integration in single cells |
| 2021-07-10 | Retreat | NA | BBQ on campus |
| 2021-07-23 | Linda Lan | Snyder Lab | TRUST4: immune repertoire reconstruction from bulk and single-cell RNA-seq data |
| 2021-07-30 | Songjie Chen | Snyder Lab | Recent studies of gut microbiome metabolomics & proteomics |
| 2021-08-06 | Yizhou Zhu | Snyder Lab | ChIP-Seq: road towards a single cell assay |
| 2021-08-20 | Hongchen Cai | Winslow Lab | Progesses in functional genomics |
| 2021-09-10 | Yuzhou Chang | Ma Lab, Ohio State University | Defining tissue architecture via reconstructing and segmenting RGB images based on spatial transcriptomics |
| 2021-10-22 | Jingyi Xiang | Weissman Lab | Targeting Innate Immunity in Cancer Therapy |
| 2021-11-19 | Rui Tang | Winslow Lab | G-baToN, a glowing cell interaction report system |
| 2021-12-03 | Meng Sun | Davis Lab | Introduction to AlphaFold2 |
3 Acknowledgement
This course is financially supported by SURPAS (the Stanford University Postdoctoral Association) and SCPA (Stanford Chinese Postdoctoral Association).
